Here is a list of all file members with links to the files they belong to:

- d -

• DEFAULT_BIN_SIZE : depth_main.cpp
• DEFAULT_CHUNK_PREFIX : chunk_main.cpp
• DEFAULT_MAX_NODES : depth_main.cpp
• DEFAULT_MAX_THREADS : minimizer_main.cpp
• DEFAULT_MIN_COVERAGE : depth_main.cpp
• DEFAULT_MIN_MAPQ : depth_main.cpp
• DEFAULT_SAMPLE_NAME : call_main.cpp
• DEFAULT_SNARL_LIMIT : index_main.cpp
• DEFAULT_TRAVERSAL_FINDER : genotype_main.cpp
• DEL : dozeu_interface.cpp , qual_adj_xdrop_aligner.cpp , xdrop_aligner.cpp
• describe_gbwt() : describe_main.cpp
• describe_gbwtgraph() : describe_main.cpp
• describe_gbz() : describe_main.cpp
• describe_gcsa() : describe_main.cpp
• describe_haplotypes() : describe_main.cpp
• describe_lcp() : describe_main.cpp
• describe_minimizer_index() : describe_main.cpp
• describe_r_index() : describe_main.cpp
• determine_jobs() : gbwt_main.cpp
• difference() : primers_main.cpp
• DZ_CIGAR_OP : dozeu_interface.cpp , xdrop_aligner.cpp , qual_adj_xdrop_aligner.cpp
• DZ_FULL_LENGTH_BONUS : xdrop_aligner.cpp , dozeu_interface.cpp , qual_adj_xdrop_aligner.cpp
• DZ_QUAL_ADJ : qual_adj_xdrop_aligner.cpp