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vg
tools for working with variation graphs
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#include <traversal_finder.hpp>
Public Member Functions | |
| PathBasedTraversalFinder (const PathHandleGraph &graph, SnarlManager &sm) | |
| virtual | ~PathBasedTraversalFinder ()=default |
| virtual vector< SnarlTraversal > | find_traversals (const Snarl &site) |
Public Member Functions inherited from vg::TraversalFinder | |
| virtual | ~TraversalFinder ()=default |
| virtual vector< Traversal > | find_traversals (const handle_t &snarl_start, const handle_t &snarl_end) |
Private Attributes | |
| const PathHandleGraph & | graph |
| SnarlManager & | snarlmanager |
| vg::PathBasedTraversalFinder::PathBasedTraversalFinder | ( | const PathHandleGraph & | graph, |
| SnarlManager & | sm | ||
| ) |
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virtualdefault |
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virtual |
Implements vg::TraversalFinder.
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private |
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private |
1.8.17