- b -

• backbone : vg::FlowSort::Growth
• backed_up : vg::io::BlockedGzipOutputStream
• background_sampler : vg::NGSSimulator
• backing : vg::BackTranslatingAlignmentEmitter , vg::ExtraNodeGraph , vg::SourceSinkOverlay , vg::SurjectingAlignmentEmitter
• backing_files : vg::HTSWriter
• backing_graph : vg::GenomeState , vg::SnarlGraph , vg::SubgraphOverlay , vg::SubpathOverlay
• backing_heads : vg::SourceSinkOverlay
• backing_path_graph : vg::PathSubgraphOverlay
• backing_stream : vg::io::StreamMultiplexer
• backing_tails : vg::SourceSinkOverlay
• backward : vg::KmerMatch , vg::NodeTraversal , vg::Visit
• bad_edit_index : vg::AlignmentValidity
• bad_mapping_index : vg::AlignmentValidity
• bad_read_position : vg::AlignmentValidity
• bad_subchains : vg::Recombinator::Statistics
• BADNESS_THRESHOLD : vg::Recombinator
• badness_threshold : vg::Recombinator::Parameters
• band_begin : vg::AlignmentChainModelVertex
• band_idx : vg::AlignmentChainModelVertex
• band_multimaps : vg::Mapper
• banded_matrices : vg::BandedGlobalAligner< IntType >
• base : vg::io::hFILE_cppstream , vg::WideningPRNG< PRNG, OutType >
• base_graph : vg::AugmentedGraph
• base_locks : vg::Packer
• base_pileup : vg::NodePileup
• baseline_error_large : vg::PoissonSupportSnarlCaller
• baseline_error_small : vg::PoissonSupportSnarlCaller
• bases : vg::BasePileup , vg::MinimizerMapper::aligner_stats_t
• bases_per_chunk : vg::Constructor
• batch_file_prefix : vg::HaplotypeIndexer
• batch_size : GiraffeMainOptions , vg::ReadFilter< Read > , vg::RebuildParameters
• begin : vg::algorithms::kmer_t , vg::algorithms::walk_t , vg::kmer_t , vg::MaximalExactMatch , vg::PathNode
• bga_middle : vg::MinimizerMapper::aligner_stats_t::stat_set_t
• BGZF_FOOTER_LENGTH : vg::HTSWriter
• bgzip_in : vg::io::MessageIterator
• bgzip_out : vg::io::MessageEmitter
• bidirectional_haplo_tx_gbwt : vg::IndexingParameters
• bin_size : vg::Packer
• bin_to_ranges : vg::StreamIndexBase
• bins_by_id_prefix : vg::StreamIndexBase
• bit_length : vg::BitString
• bits : vg::BitString
• block_length : gafkluge::GafRecord
• border : vg::PhaseUnfolder
• border_offsets : vg::Exon
• border_steps : vg::Exon
• bottom : haplo::int_itvl_t
• bottom_diag : vg::BandedGlobalAligner< IntType >::BAMatrix
• buf : vg::io::fdistream , vg::io::fdostream , vg::io::streamistream
• buffer : vg::io::BlockedGzipOutputStream , vg::io::fdinbuf , vg::io::streaminbuf , vg::ParallelKFFReader , vg::VcfBuffer , vg::zstd_ifstream , vg::zstd_ofstream
• buffer_size : vg::GAFSorterParameters
• BUFFER_SIZE : vg::GAFSorterParameters
• buffer_size : vg::ReadFilter< Read > , vg::Recombinator::Parameters
• bufSize : vg::io::fdinbuf , vg::io::streaminbuf
• build : GBWTConfig
• BUILD_HOST : vg::Version
• build_jobs : GBWTConfig
• BUILD_USER : vg::Version
• builder : vg::RecombinatorHaplotype
• burn_in : vg::MCMCGenotyper
• by_id : vg::PathIndex
• by_start : vg::PathIndex
• byte_count : vg::io::BlockedGzipInputStream , vg::io::BlockedGzipOutputStream